edgeR error: plotMDS() Error

Discussion in 'Getting Started' started by xiaoxiaodong2013, Nov 12, 2013.

  1. xiaoxiaodong2013

    xiaoxiaodong2013 New Member

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    >plotMDS(cds)
    Error in cmdscale(as.dist(dd), k = ndim) : 'k' must be in {1, 2, .. n - 1}

    When I used plotMDS(cds) command in R, what did this mean? I used two samples from RNAseq data to compare the differential expression between two samples.

    DevynCJohnson likes this.

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